| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Andaman Sea | Sea/Bay/Gulf | native | 11441 |
| Arabian Sea | Sea/Bay/Gulf | native | 9360 |
| Calamianes Islands | Sea/Bay/Gulf | native | 48613 |
| Coral Sea and GBR | Sea/Bay/Gulf | native | 11441 |
| Dauin-Apo I. | Sea/Bay/Gulf | native | 127519 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 48497 |
| Gulf of Oman | Sea/Bay/Gulf | native | 11441 |
| Indian Ocean | Sea/Bay/Gulf | native | 9360 |
| Indonesian Sea | Sea/Bay/Gulf | native | 9360 |
| Milne Bay | Sea/Bay/Gulf | native | 41464 |
| North Australian Shelf | Sea/Bay/Gulf | native | 9360 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 9360 |
| Pacific Ocean | Sea/Bay/Gulf | native | 9360 |
| Persian Gulf | Sea/Bay/Gulf | native | 9360 |
| Red Sea | Sea/Bay/Gulf | native | 84159 |
| Somali Coastal Current | Sea/Bay/Gulf | native | 9360 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |