| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agulhas Current | Sea/Bay/Gulf | native | 5578 |
| Andaman and Nicobar Islands | Sea/Bay/Gulf | native | 118627 |
| Arabian Sea | Sea/Bay/Gulf | native | 244 |
| Bay of Bengal | Sea/Bay/Gulf | native | 118627 |
| Coral Sea and GBR | Sea/Bay/Gulf | native | 48497 |
| East China Sea | Sea/Bay/Gulf | native | 47843 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 48497 |
| Gulf of Thailand | Sea/Bay/Gulf | native | 244 |
| Indian Ocean | Sea/Bay/Gulf | native | 244 |
| Indonesian Sea | Sea/Bay/Gulf | native | 244 |
| Manila Bay | Sea/Bay/Gulf | native | 47737 |
| North Australian Shelf | Sea/Bay/Gulf | native | 244 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 244 |
| Northwest Australian Shelf | Sea/Bay/Gulf | native | 244 |
| Pacific Ocean | Sea/Bay/Gulf | native | 244 |
| Somali Coastal Current | Sea/Bay/Gulf | native | 244 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Southern China | Sea/Bay/Gulf | native | 244 |
| Southern Palawan | Sea/Bay/Gulf | native | 47737 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 244 |
| Yellow Sea | Sea/Bay/Gulf | native | 47843 |