| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Amur | River (basin) | native | 26334 |
| Arkansas River | River (basin) | introduced | 10294 |
| Australian | Zoogeographic realm | introduced | 1739 |
| Balsas river | River (basin) | introduced | 58351 |
| Bhimtal Lake | Lake | introduced | 89721 |
| Bosten Lake | Lake | native | 41093 |
| Buxa River | River (basin) | introduced | 89719 |
| Caspian Sea | Lake | introduced | 39702 |
| Cauvery | River (basin) | introduced | 43636 |
| Da River | River (basin) | introduced | 89724 |
| Danube | River (basin) | introduced | 48 |
| Don | River (basin) | native | 26334 |
| Erqishi River | River (basin) | native | 41093 |
| Ethiopian | Zoogeographic realm | introduced | 52193 |
| Gaylegphug | River (basin) | introduced | 40882 |
| Great Lakes | Lake | introduced | 120758 |
| Jayanti River | River (basin) | introduced | 89719 |
| Kabul | River (basin) | introduced | 39701 |
| Kuban River | River (basin) | questionable | 58296 |
| Lake Biwa | Lake | introduced | 78994 |
| Lake Erie | Lake | introduced | 120758 |
| Lake Huron | Lake | introduced | 120758 |
| Lake Ontario | Lake | introduced | 120758 |
| Lake St. Clair | Lake | introduced | 120758 |
| Marmara | Lake | introduced | 86351 |
| Mississippi River | River (basin) | introduced | 10294 |
| Missouri River | River (basin) | introduced | 78789 |
| Naukuchiatal Lake | Lake | introduced | 89721 |
| Nearctic | Zoogeographic realm | introduced | 12204 |
| Neotropical | Zoogeographic realm | introduced | 48 |
| Oriental | Zoogeographic realm | introduced | 1739 |
| Palearctic | Zoogeographic realm | endemic | 48 |
| Pearl River (China) | River (basin) | native | 89718 |
| Rio Grande | River (basin) | introduced | 78807 |
| Sabaki | River (basin) | introduced | 30558 |
| Sakhalin Island | River (basin) | native | 58299 |
| Tarim | River (basin) | native | 41093 |
| Tigris | River (basin) | introduced | 39702 |
| Toba | Lake | introduced | 57970 |
| Uruguay | River (basin) | introduced | 79585 |
| Volga | River (basin) | native | 26334 |
| Xi Jiang | River (basin) | native | 59043 |
| Yangtze Estuary | Sea/Bay/Gulf | native | 117603 |
| Yili River | River (basin) | native | 41093 |