| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agulhas Current | Sea/Bay/Gulf | native | 168 |
| Andaman Sea | Sea/Bay/Gulf | native | 168 |
| Arabian Sea | Sea/Bay/Gulf | native | 171 |
| Bay of Bengal | Sea/Bay/Gulf | native | 168 |
| Coral Sea and GBR | Sea/Bay/Gulf | native | 168 |
| East Central Australian Shelf | Sea/Bay/Gulf | native | 168 |
| East China Sea | Sea/Bay/Gulf | native | 168 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 48497 |
| Gulf of Aqaba | Sea/Bay/Gulf | native | 58021 |
| Indian Ocean | Sea/Bay/Gulf | native | 168 |
| Indonesian Sea | Sea/Bay/Gulf | native | 168 |
| Kuroshio Current | Sea/Bay/Gulf | native | 559 |
| Milne Bay | Sea/Bay/Gulf | native | 41464 |
| North Australian Shelf | Sea/Bay/Gulf | native | 168 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 168 |
| Northwest Australian Shelf | Sea/Bay/Gulf | native | 168 |
| Pacific Ocean | Sea/Bay/Gulf | native | 168 |
| Persian Gulf | Sea/Bay/Gulf | native | 171 |
| Polynesian Waters | Sea/Bay/Gulf | native | 168 |
| Rapa-Pitcairn | Sea/Bay/Gulf | native | 121505 |
| Red Sea | Sea/Bay/Gulf | native | 84159 |
| Sea of Japan/East Sea | Sea/Bay/Gulf | native | 559 |
| Sogod Bay | Sea/Bay/Gulf | native | 46392 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Southern China | Sea/Bay/Gulf | native | 31075 |
| Southern Palawan | Sea/Bay/Gulf | native | 114805 |
| Spratly Islands | Sea/Bay/Gulf | native | 48445 |
| Tahiti I. | Sea/Bay/Gulf | native | 168 |
| Tubbataha Reefs | Sea/Bay/Gulf | native | 53416 |
| Yellow Sea | Sea/Bay/Gulf | native | 5193 |