| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agulhas Current | Sea/Bay/Gulf | native | 3145 |
| Indian Ocean | Sea/Bay/Gulf | native | 8631 |
| Indonesian Sea | Sea/Bay/Gulf | native | 8631 |
| Kuroshio Current | Sea/Bay/Gulf | native | 37429 |
| Lanuza Bay | Sea/Bay/Gulf | native | 104756 |
| Leyte Gulf | Sea/Bay/Gulf | native | 31411 |
| North Australian Shelf | Sea/Bay/Gulf | native | 9710 |
| Northwest Australian Shelf | Sea/Bay/Gulf | native | 9710 |
| Pacific Ocean | Sea/Bay/Gulf | native | 9710 |
| Shark Bay | Sea/Bay/Gulf | native | 115274 |
| Somali Coastal Current | Sea/Bay/Gulf | native | 3145 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Tubbataha Reefs | Sea/Bay/Gulf | native | 121724 |
| West Central Australian Shelf | Sea/Bay/Gulf | native | 115274 |