| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Adriatic Sea | Sea/Bay/Gulf | introduced | 96525 |
| Aegean Sea | Sea/Bay/Gulf | introduced | 113897 |
| Agulhas Current | Sea/Bay/Gulf | native | 5213 |
| Andaman Sea | Sea/Bay/Gulf | native | 3539 |
| Arabian Sea | Sea/Bay/Gulf | native | 2872 |
| Atulayan Bay | Sea/Bay/Gulf | native | 41469 |
| Australian | Zoogeographic realm | native | 86942 |
| Bay of Bengal | Sea/Bay/Gulf | native | 5736 |
| Chilika Lake/Lagoon | Lagoon | native | 95460 |
| Coral Sea and GBR | Sea/Bay/Gulf | native | 48497 |
| Davao Gulf | Sea/Bay/Gulf | native | 43437 |
| Ethiopian | Zoogeographic realm | native | 2871 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 48497 |
| Gulf of Oman | Sea/Bay/Gulf | native | 47613 |
| Indian Ocean | Sea/Bay/Gulf | native | 7300 |
| Indonesian Sea | Sea/Bay/Gulf | native | 5978 |
| Lagonoy Gulf | Sea/Bay/Gulf | native | 43283 |
| Manila Bay | Sea/Bay/Gulf | native | 35686 |
| Mediterranean Sea | Sea/Bay/Gulf | introduced | 96525 |
| North Aegean | Sea/Bay/Gulf | introduced | 113897 |
| North Australian Shelf | Sea/Bay/Gulf | native | 7300 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 7300 |
| Northwest Australian Shelf | Sea/Bay/Gulf | native | 7300 |
| Oriental | Zoogeographic realm | native | 3539 |
| Ormoc Bay | Sea/Bay/Gulf | native | 45140 |
| Pacific Ocean | Sea/Bay/Gulf | native | 7300 |
| Palearctic | Zoogeographic realm | introduced | 113897 |
| Peng-hu Island | Sea/Bay/Gulf | native | 55073 |
| Persian Gulf | Sea/Bay/Gulf | native | 11441 |
| Red Sea | Sea/Bay/Gulf | native | 84159 |
| Samar Sea | Sea/Bay/Gulf | native | 29039 |
| San Miguel Bay | Sea/Bay/Gulf | native | 45161 |
| San Pedro Bay | Sea/Bay/Gulf | native | 46241 |
| Sikao Creek | River (basin) | native | 52823 |
| Sorsogon Bay | Sea/Bay/Gulf | native | 47531 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Southern China | Sea/Bay/Gulf | native | 94637 |
| Southern Palawan | Sea/Bay/Gulf | native | 114805 |
| Thermaikos Gulf | Sea/Bay/Gulf | introduced | 113897 |
| Tung-hsiao | Sea/Bay/Gulf | native | 43510 |
| Yellow Sea | Sea/Bay/Gulf | native | 4868 |